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Map_Data : Wheat, Physical, Group 5

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Map Ta-Physical-Sarma-5A
    Ta-Physical-Sarma-5B
    Ta-Physical-Sarma-5D 
Species Triticum aestivum
Type Physical 
Map_units Percent of arm length 
Reference Physical characterization of the homoeologous Group 5
            chromosomes of wheat in terms of rice linkage blocks, and
            physical mapping of some important genes
Contact Snape, John
Remarks Mapping was done on 64 deletion lines produced in Chinese                                                                                                                                                                                                                                                                                                                                                                                                     
          Spring using the gametocidal chromosome of Aegilops                                                                                                                                                                                                                                                                                                                                                                                                         
          cylindrica.  Group 5A deletion lines included 14 for the                                                                                                                                                                                                                                                                                                                                                                                                    
          short arm and 20 for the long arm.  Group 5B deletion lines                                                                                                                                                                                                                                                                                                                                                                                                 
          included 10 for the short arm and 9 for the long arm.  Group                                                                                                                                                                                                                                                                                                                                                                                                
          5D deletion lines included 6 for the short arm and 5 for the                                                                                                                                                                                                                                                                                                                                                                                                
          long arm.                                                                                                                                                                                                                                                                                                                                                                                                                                                   
        Southern blots of the deletion lines provided physical map                                                                                                                                                                                                                                                                                                                                                                                                    
          placement of the markers.  Markers with known positions on                                                                                                                                                                                                                                                                                                                                                                                                  
          the rice genome were also used revealing regions of synteny                                                                                                                                                                                                                                                                                                                                                                                                 
          between wheat and rice.  The entire rice chromosome 9 is                                                                                                                                                                                                                                                                                                                                                                                                    
          syntenous to a region on the long arm of Group 5, and                                                                                                                                                                                                                                                                                                                                                                                                       
          segments of rice chromosome 3, 11 and 12 also showed                                                                                                                                                                                                                                                                                                                                                                                                        
          conserved synteny.  See the records for breakpoint_intervals                                                                                                                                                                                                                                                                                                                                                                                                
          for more detailed account of rice synteny.                                                                                                                                                                                                                                                                                                                                                                                                                    
Data_curated Carollo, Victoria 03.03
Locus[Show (95)]
Breakpoint[Show (29)]
Breakpoint_interval[Show (33)]

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