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Sample Queries:
Correlated contigs
Compare a list of contigs between two contigsets
Mapped contigs
Indirectly mapped ESTs
Dump a Contigset
Compose a query or select one from the menu:
// What contigs in another assembly contain any of the ESTs that are in my // contig of interest? // To use: Replace "DSW01C4_Contig3179-1" below with your contig of interest. // ("DSW01C4_Contig" is the prefix for WheatSNP assembly 1, instead of // "contigs.".) select Contig::C, Members::M, Correlated_contigs::CC from C in class EST_Contig where C = "DSW01C4_Contig3179-1", M in C->Contig_members->External_DB[2], CC in M->EST_name->Contig where C !=CC order by :3
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